Hugo van den Berg - Publications

H. A. van den Berg
 Design principles of adaptive cellular immunity for artificial immune systems.
Submitted
H. A. van den Berg, L. Wooldridge, B. Laugel and A. K. Sewell
Coreceptor CD8-driven modulation of T cell antigen receptor specificity.
J. Theor. Biol. in press
B. Laugel, H. A. van den Berg, E. Gostick, D. K. Cole, L. Wooldridge, J. M. Boulter, A. Milicic, D. A. Price, and A. K. Sewell
Different T cell receptor affinity thresholds and CD8 coreceptor dependency govern cytotoxic T lymphocyte activation and tetramer binding properties
J. Biol. Chem. 282 (2007) 23799-23810
H. A. van den Berg, M. V. Orlov and Yu. N. Kiselev
The malthusian parameter in microbial ecology and evolution: An optimal control treatment.
Submitted
A. N. W. Hone and H. A. van den Berg
Mathematical analysis of dynamics and performance of Artificial Immune Systems.
In: In Silico Immunology D. Flower and J. Timmis, eds Springer (2007)
H. A. van den Berg and D. A. Rand
Quantitative theories of T cell responsiveness.
Immunological Reviews 216 (2007) 81-92
A. N. W. Hone and H. A. van den Berg
Modelling a cytokine network.
Proceedings of the IEEE Symposion on Foundations of Computational Intelligence (2007)
L. Wooldridge, H. A. van den Berg, M. Glick, E. Gostick, J. M. Brenchley, D. C. Douek, D. A. Price and A. K. Sewell
Interaction between the CD8 coreceptor and MHC class I stabilizes TCR-antigen complexes at the cell surface.
Journal of Biological Chemistry 280 (2005) 27491-27501
H. A. van den Berg
Control of T cell immunity: design principles without the wetware.
Preprint UKC/IMS/04/36 University of Kent (2004)
H. A. van den Berg and D. A. Rand
Foreigness as a matter of degree: The relative immunogenicity of peptide/MHC ligands.
J. Theor. Biol. 231 (2004) 535-548
H. A. van den Berg and D. A. Rand
Dynamics of T cell activation threshold tuning.
J. Theor. Biol. 228 (2004) 397-416
H. A. van den Berg and Yu. N. Kiselev
Expansion and contraction of the cytotoxic T lymphocyte response—an optimal control approach.
Bull. Math. Biol. 66 (2004) 1345-1369
H. A. van den Berg and C. Molina-París
How thymic presentation determines the target of negative selection.
J. Theor. Med. 5 (2003) 1-22
H. A. van den Berg, Yu. N. Kiselev and M. V. Orlov
Studying mathematical models of resource allocation among a cell's assimilator mechanisms.
J. Math. Sci. 116 (2003) 3683-3732
(Translated from ``Issledovanie matematicheskikh modelej raspredeleniya resursob mezhdu assimilyatornymi mekhanizmami b kletke.'' Itogi Nauki i Tekhniki 97 (2001))
M. H. Wooders and H. A. van den Berg
Female competition, evolution and the battle of the sexes.
The Warwick Economics Research Paper Series 620
H. A. van den Berg and D. A. Rand
Antigen presentation as a diversity filter that enhances immune efficacy.
J. Theor. Biol. 224 (2003) 249-267
H. A. van den Berg, N. J. Burroughs and D. A. Rand
Quantifying the strength of ligand antagonism in TCR triggering.
Bull. Math. Biol. 64 (2002) 781-808
H. A. van den Berg, Yu. N. Kiselev and M. V. Orlov
Optimal allocation of building blocks between nutrient uptake systems in a microbe.
J. Math. Biol. 44 (2002) 276-296
H. A. van den Berg, D. A. Rand and N. J. Burroughs
A reliable and safe T cell repertoire based on low-affinity T cell receptors
J. Theor. Biol. 209 (2001) 465-486
H. A. van den Berg, Yu. N. Kiselev and M. V. Orlov
Analysis of trajectories of a nonlinear system of differential equations.
Differential Equations 37 (2001) 1515-1525
(Translated from ``Issledovanie traektorij odnoj nelinejnoj sistemy differentsial'nykh uravnenij.'' Differentsial'nye Uravneniya 11 (2001) 1443-1452)
H. A. van den Berg
How microbes can achieve balanced growth in a fluctuating environment.
Acta Biotheor. 49 (2001) 1-21
M. H. Wooders and H. A. van den Berg
The battle of the sexes over the distribution of male surplus
Economics Bulletin 3(17) (2001) 1-9
W. J. van der Steen and H. A. van den Berg
Dissolving disputes over genic selectionism.
J. Evol. Biol. 12 (1999) 177-183
H. A. van den Berg, H. M. Jonkers, S. van Bergeijk and S. A. L. M. Kooijman
Biotransformation of dimethylsulfoniopropionate (DMSP) in a sedimental microbial ecosystem subject to diel variations of oxic and anoxic conditions: a simple mathematical model.
FEMS Microbiol. Ecol. 26 (1998) 1-16
H. A. van den Berg
Propagation of permanent perturbations in food chains and food webs.
Ecol. Model. 107 (1998) 225-235
H. A. van den Berg
Multiple nutrient limitation in unicellulars: reconstructing Liebig's law.
Math. Biosci. 149 (1998) 1-22
H. A. van den Berg
A generic view of classic microbial growth models.
Acta Biotheor. 46 (1998) 117-130
H. A. van den Berg, Yu. N. Kiselev, M. V. Orlov and S. A. L. M. Kooijman
Optimal allocation between nutrient uptake and growth in a microbial trichome.
J. Math. Biol. 37 (1998) 28-48
H. A. van den Berg
Modelling the metabolic versatility of a microbial trichome.
Bull. Math. Biol. 60 (1998) 131-150
C. Zonneveld, H. A. van den Berg and S. A. L. M. Kooijman
Modelling carbon cell quota in light-limited phytoplankton.
J. Theor. Biol. 188 (1997) 215-226
N. D. de With and H. A. van den Berg
Neuroendocrine control of hydromineral metabolism in molluscs, with special emphasis on the pulmonate freshwater snail, Lymnaea stagnalis.
Adv. Comp. Endocrin. 1 (1992) 83 - 99
H. A. van den Berg
Model for mechanics of mollusc systemic heart.
J. Comp. Biochem. Physiol. 101A (1992) 835 - 844